Phosphotyrosine-containing dipeptides as high-affinity ligands for the p56lck SH2 domain

J Med Chem. 1999 Feb 25;42(4):722-9. doi: 10.1021/jm980612i.

Abstract

Src homology-2 (SH2) domains are noncatalytic motifs containing approximately 100 amino acid residues that are involved in intracellular signal transduction. The phosphotyrosine-containing tetrapeptide Ac-pYEEI binds to the SH2 domain of p56lck (Lck) with an affinity of 0.1 microM. Starting from Ac-pYEEI, we have designed potent antagonists of the Lck SH2 domain which are reduced in peptidic character and in which the three carboxyl groups have been eliminated. The two C-terminal amino acids (EI) have been replaced by benzylamine derivatives and the pY + 1 glutamic acid has been substituted with leucine. The best C-terminal fragment identified, (S)-1-(4-isopropylphenyl)ethylamine, binds to the Lck SH2 domain better than the C-terminal dipeptide EI. Molecular modeling suggests that the substituents at the 4-position of the phenyl ring occupy the pY + 3 lipophilic pocket in the SH2 domain originally occupied by the isoleucine side chain. This new series of phosphotyrosine-containing dipeptides binds to the Lck SH2 domain with potencies comparable to that of tetrapeptide 1.

MeSH terms

  • Binding, Competitive
  • Dipeptides / chemical synthesis*
  • Dipeptides / chemistry
  • Dipeptides / metabolism
  • Enzyme Inhibitors / chemical synthesis*
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / metabolism
  • Ligands
  • Lymphocyte Specific Protein Tyrosine Kinase p56(lck) / antagonists & inhibitors
  • Lymphocyte Specific Protein Tyrosine Kinase p56(lck) / metabolism*
  • Models, Molecular
  • Phosphotyrosine / chemistry*
  • Structure-Activity Relationship
  • src Homology Domains*

Substances

  • Dipeptides
  • Enzyme Inhibitors
  • Ligands
  • Phosphotyrosine
  • Lymphocyte Specific Protein Tyrosine Kinase p56(lck)